BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A02SP1|AL429312
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig410 228 2e-59
>3x_Contig410
Length = 1641
Score = 228 bits (114), Expect = 2e-59
Identities = 127/136 (93%)
Strand = Plus / Minus
Query: 12 gatcttcgaaagtwctgaagagttttccatgattcttaaacataatgggaaaatawcwrt 71
||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | |
Sbjct: 136 gatcttcgaaagttctgaagagttttccatgattcttaaacataatgggataatatctgt 77
Query: 72 mmatagaaggaaactgatcacttctgcagaatcgtttttcactagagcaccgatgacacc 131
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ccttagaaggaaactgatcacttctgcagaatcgtttttcactagagcaccgatgacacc 17
Query: 132 tagtgaagtwagcctt 147
||||||||| ||||||
Sbjct: 16 tagtgaagttagcctt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5468
Number of Sequences: 1807
Number of extensions: 5468
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)